Chickpea Transcriptome Database

Search the Chickpea Transcriptome Database for gene expression, microsatellite, SNP, and comparative genomics data.

223.31.159.7/ctdb
Chickpea Transcriptome Database homepage screenshot

About Chickpea Transcriptome Database

The Chickpea Transcriptome Database (CTDB) is a web portal for searching and querying chickpea (Cicer arietinum) transcriptome data. It brings together transcript sequences, functional annotation, conserved domains, transcription factor families, molecular markers (microsatellites and single nucleotide polymorphisms), gene expression, and comparative genomics with other legumes. The source describes it as a freely available resource for functional and applied genomics research in chickpea and other legumes.

The homepage lists separate search pages for gene expression, microsatellites, SNPs, and comparative genomics. The homepage does not describe data upload, account features, or cloud services. The most recent news item shown is dated 2014, so the homepage does not confirm the current release status.

Key features

  • BLAST search across chickpea transcriptome sequences
  • Function, identifier, domain, and Gene Ontology searches
  • Transcription factor family search
  • Gene expression profiles, highly expressed transcripts, and ortholog search
  • Microsatellite search for polymorphic, perfect, and compound markers, with batch download
  • SNP search
Best for: Researchers and plant breeders working on chickpea functional or applied genomics.
Good for
  • Combines transcriptome sequences, annotation, molecular markers, and comparative genomics in one portal
  • Described as a freely available resource

Chickpea Transcriptome Database at a glance

Type
Website
Pricing
Not confirmed. Check the site
Platforms
Web
Open source
Not stated
Last checked
Oct 6, 2026 · Online when checked
Listed
Oct 5, 2026

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Chickpea Transcriptome Database FAQ

Is the database free to use?
The homepage describes the Chickpea Transcriptome Database as a freely available resource. Pricing is not stated, so the known pricing is listed as unknown.
What types of data can I search?
The homepage lists search pages for gene expression, microsatellites, SNPs, and comparative genomics. It also lists BLAST, function, identifier, domain, GO, and transcription factor family searches.
How should researchers cite the database?
The homepage asks researchers who find the database useful to cite Verma M, Kumar V, Patel RK, Garg R, Jain M (2015), CTDB: An integrated chickpea transcriptome database for functional and applied genomics, PLoS ONE, 10: 0136880.
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