Share dynamical models of biological systems and visualize simulation results with the BioSimulations web application.
MorpheusML model repository
Morpheus lets users browse models of multicellular simulations, including built-in examples and models linked to publications.
About MorpheusML model repository
The MorpheusML model repository hosts multicellular simulation models in three groups: built-in didactic examples that can serve as templates, contributed unpublished work from named contributors, and published models that are original or reproduce a published result.
Models can be found with full-text search by author or cellular process and with keyword tags such as model formalism. Each model has a persistent ID in the format M..... retrievable through an identifiers.org URL, and users can contribute by uploading MorpheusML-encoded model files.
Key features
- Browse built-in didactic examples usable as templates
- Browse contributed unpublished models from named contributors
- Browse published models reproducing or from publications
- Search models by author or cellular process
- Find related models through keyword tags
- Retrieve model files via persistent identifiers.org URLs
Best for: Researchers and students using Morpheus who need example, contributed, or publication-linked multicellular simulation models.
Good for
- Each model has a persistent ID and URL for citation
- Covers built-in templates, contributed work, and published models
- Search and tags support lookup by author, process, or formalism
MorpheusML model repository at a glance
- Website
- morpheus.gitlab.io/model
- Category
- Research & Data › Open Data & Datasets
- Type
- Website
- Pricing
- Not confirmed. Check the site
- Platforms
- Web
- Open source
- Not stated
- Language
- English
- Last checked
- Oct 5, 2026 · Online when checked
- Listed
- Oct 5, 2026
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MorpheusML model repository FAQ
How can I search for models?
Use the full-text search field in the top-left of each category's page to find models by author or cellular process, or select a keyword tag to list related models.
How do I cite a model?
Each model has a unique ID in the format M..... and its page, XML file, and related files can be retrieved via a persistent URL in the format https://identifiers.org/morpheus/M.....
How can I contribute a model?
You can upload MorpheusML-encoded model files yourself, with a step-by-step submission guide in the FAQ and direct contact support for guidance.
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