Reactome is a pathway database with tools for visualizing, interpreting, and analyzing pathway knowledge.
InnateDB
InnateDB catalogs genes, proteins, experimentally verified interactions, and pathways involved in innate immune responses to infection.
About InnateDB
InnateDB is a publicly available database of genes, proteins, experimentally verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. It integrates interactions and pathways from major public databases with manually curated data, with 18,780 interactions curated by the InnateDB team to date.
Users can search for molecules, interactions and pathways, run pathway and Gene Ontology over-representation analysis, build and visualize interaction networks, and download curated interaction datasets or access data via web services.
Key features
- Search genes and proteins involved in innate immune response
- Search and visualize experimentally-verified molecular interactions
- Pathway over-representation analysis for gene/protein lists
- Gene Ontology over-representation analysis for gene lists
- Build and visualize molecular interaction networks from gene lists
- Download curated interactions and access data via web services
Best for: Researchers studying innate immunity genes, interactions and pathways in humans, mice and bovines.
Good for
- Integrates manually curated data with interactions and pathways from major public databases
- Covers genes, proteins and interactions for humans, mice and bovines
- Provides pathway, Gene Ontology, network and TFBS analysis with visualization tools
InnateDB at a glance
- Website
- innatedb.com
- Category
- Research & Data › Open Data & Datasets
- Type
- Website
- Pricing
- Not confirmed. Check the site
- Platforms
- Web
- Open source
- Not stated
- Last checked
- Oct 5, 2026 · Online when checked
- Listed
- Oct 5, 2026
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