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Mouse Genome Informatics
Mouse Genome Informatics integrates genetic, genomic, and biological information about laboratory mice, with search and analysis tools.
About Mouse Genome Informatics
Mouse Genome Informatics (MGI) is an international database resource for the laboratory mouse. It integrates genetic, genomic, and biological information and provides search and analysis tools covering genes and markers, phenotypes and mutant alleles, human disease connections, gene expression, strains, SNPs and polymorphisms, vertebrate homology, and mouse models of human cancer.
Key features
- Search genes, markers, phenotypes, alleles, diseases, strains and SNPs
- Browse genomes with JBrowse and Multiple Genome Viewer tools
- Search gene expression data and expression literature
- Download reports and use batch query and analysis tools
- Browse ontologies including Gene Ontology and Human Disease Ontology
- Submit data and find mice through IMSR
Best for: Researchers studying mouse genetics and human health who need integrated mouse genetic, genomic, and biological data.
Good for
- Integrates genetic, genomic, and biological data for the laboratory mouse.
- Offers search, analysis, download and batch tools in one resource.
- Includes getting-started guides, tutorials and contactable user support.
Watch out for
- Pricing is not stated on the homepage.
- The site uses cookies, including essential and analytics cookies.
- Some sequence searches use BLAST at NCBI, an external service.
Mouse Genome Informatics at a glance
- Website
- informatics.jax.org
- Category
- Research & Data › Health & Medical Data
- Type
- Website
- Pricing
- Not confirmed. Check the site
- Platforms
- Web
- Open source
- Not stated
- Last checked
- Oct 6, 2026 · Online when checked
- Listed
- Oct 5, 2026
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Broad GDAC Firehose provides access to cancer genomics data across cohorts and data types, including RNA and methylation.
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Mouse Genome Informatics FAQ
What kind of data does MGI cover?
MGI integrates genetic, genomic, and biological data for the laboratory mouse, including genes and markers, phenotypes and mutant alleles, human disease connections, gene expression, strains, SNPs, homology, tumors, and references.
Can MGI data be downloaded?
Yes. MGI provides downloads for reports and data including genes and markers, sequence data, vertebrate homology, Gene Ontology data, strains and polymorphisms, gene expression, phenotypic data, nomenclature, references, clone collections, and DNA mapping panels.
Are there guides for new users?
MGI offers an introduction to mouse genetics, a text and video guide on how to use MGI, and a Cre Portal tutorial.
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